\ BIP! Finder for COVID-19 - Impact-based ranking

BIP! Finder for COVID-19

This version of BIP! Finder aims to ease the exploration of COVID-19-related literature by enabling ranking articles based on various impact metrics.

Last Update: 18 - 01 - 2023 (628506 entries)

Provided impact measures:
Popularity: Citation-based measure reflecting the current impact.
Influence: Citation-based measure reflecting the total impact.
Reader Attention: The current number of Mendeley readers.
Social Media Attention: The number of recent tweets related to this article.
*More details on these impact measures can be found here.
Score interpretations:
Exceptional score (in top 0.01%).
Substantial score (in top 1%).
Average score (in bottom 99%).
Score not available.
Main data sources:
CORD-19 dataset(1) (list of papers)
LitCovid hub(2) (list of papers)
PMC & PubMed (citations)
Mendeley (number of readers)
COVID-19-TweetIDs(3) (tweets)

Use:  Impact  Relevance & Impact
TitleVenueYearImpactSource
6551Intricacies of the SARS-CoV-2 spike transmembrane trimer organization  

Biophys J2022       CORD-19
6552Elucidating the distinct structural features of the SARS-CoV-2 spike protein fusion domain  

Biophys J2022       CORD-19
6553Nanoscale membrane curvature facilitate chikungunya viral replication complex assembly via nonstructural protein 1  

Biophys J2022       CORD-19
6554Predictive mathematical models of the growth of the COVID-19 pandemic  

Biophys J2022       CORD-19
6555Conformational changes in SARS-CoV-2 spike from the delta variant enhances viral transmissibility  

Biophys J2022       CORD-19
6556Impact of SARS-CoV-2 spike protein on alpha7 nicotinic acetylcholine receptor in cells  

Biophys J2022       CORD-19
6557Binding and compaction function of structural domains of SARS-CoV-2 nucleocapsid (N) protein on a single stranded nucleic acid substrate  

Biophys J2022       CORD-19
6558Decreased interfacial dynamics caused by the N501Y mutation in the SARS-Cov-2 s1 spike:ACE2 complex  

Biophys J2022       CORD-19
6559Automated refinement protocol to improve the quality of protein structures deposited in the protein data bank, applied to SARS-Cov-2  

Biophys J2022       CORD-19
6560Fluorescence correlation spectroscopy measurements of proteins expressed inside microcapsules  

Biophys J2022       CORD-19
6561Machine learning reveals the critical interactions for SARS-CoV-2 spike protein binding to ACE2  

Biophys J2022       CORD-19
6562Whole-cell quantitative imaging of structural changes induced by SARS-CoV-2 using soft X-ray tomography  

Biophys J2022       CORD-19
6563Expression of SARS-CoV-2-ORF3a protein induces cardiomyocyte damage  

Biophys J2022       CORD-19
6564Structure function characterization of SARS CoV2 proteases for COVID-19 antiviral development  

Biophys J2022       CORD-19
6565Ensemble-based, glycan-dependent epitope analysis of SARS-CoV-2 spike protein  

Biophys J2022       CORD-19
6566Developing lectins as inhibitors of SARS-CoV-2  

Biophys J2022       CORD-19
6567Cryo-electron tomography of in vivo reconstituted SARS-CoV-2 replication/transcription organelles  

Biophys J2022       CORD-19
6568Comprehensive virtual screening of 4.8k flavonoids reveals novel insights into the allosteric inhibition of SARS-CoV-2 MPRO  

Biophys J2022       CORD-19
6569Multiscale simulations of viruses  

Biophys J2022       CORD-19
6570The functional evolution of ACE2 receptor binding of Betacoronaviruses in the past, present and uncertain future  

Biophys J2022       CORD-19
6571The spike-ACE2 interaction underlying SARS-CoV-2 infection and inhibition is enhanced by intermolecular cross linking  

Biophys J2022       CORD-19
6572Structure, dynamics and nanomechanics of wild-type and alpha-variant SARS-CoV-2 virions  

Biophys J2022       CORD-19
6573Computationally engineered ACE2 decoy binds with nanomolar affinity with the SARS-CoV-2 spike protein  

Biophys J2022       CORD-19
6574Concerted hinge motions in SARS-CoV-2 spike modulated by glycan-glycan and glycan-lipid interactions  

Biophys J2022       CORD-19
6575AI-Driven prediction of binding trends of SARS-CoV-2 variants from atomistic simulations  

Biophys J2022       CORD-19
6576Probing remdesivir nucleotide analogue insertion to SARS-CoV-2 RNA dependent RNA polymerase in viral replication  

Biophys J2022       CORD-19
6577Understanding viral RNA recognition by lab-evolved proteins  

Biophys J2022       CORD-19
6578Structural and dynamical impact of the two-nucleotide difference in sequence between SARS-CoV and SARS-CoV-2 s2m using molecular dynamics  

Biophys J2022       CORD-19
6579Stem-loop II motif (s2m) structural and dynamical differences between SARS-CoV-2 and b.1.617.2 (Delta) variant  

Biophys J2022       CORD-19
6580Quantitative analysis of hypericin interaction with SARS-CoV 2 and with a model membrane  

Biophys J2022       CORD-19
6581Membrane activity of viral capsid proteins regulates entry and budding stages  

Biophys J2022       CORD-19
6582Determining the affinity of anti-SARS-CoV-2 antibody directly in biological samples and the influence of affinity on quantitative antibody assays  

Biophys J2022       CORD-19
6583Viral-host RNA-RNA interactions in SARS-CoV-2: study of MIR-760-3p interactions with the genome 3'-untranslated region  

Biophys J2022       CORD-19
6584Molecular mechanism for conformational activation of SARS-CoV-2 RNA polymerase by nucleoside triphosphate  

Biophys J2022       CORD-19
6585Characterization of the S2M G15U mutation associated with the SARS-CoV-2 delta variant  

Biophys J2022       CORD-19
6586Characterizing nucleic acid interactions with the N-Terminal binding domain of the SARS-CoV-2 nucleocapsid protein  

Biophys J2022       CORD-19
6587A year in the life of SARS-CoV-2 Mpro: molecular modeling and analysis of clinically observed Mpro variants from the first year of the COVID-19 pandemic  

Biophys J2022       CORD-19
6588Architecture and antigenicity of the nipah virus attachment glycoprotein  

Biophys J2022       CORD-19
6589The discovery of antivirals and novel targets for SARS-CoV-2 and EV-A71  

Biophys J2022       CORD-19
6590Comparing structural ensembles with DiffNets helps explain the activation mechanism of the SARS-CoV-2 protein NSP16  

Biophys J2022       CORD-19
6591Host cell membrane capture by the SARS-CoV-2 spike protein fusion intermediate  

Biophys J2022       CORD-19
6592Unraveling SARS-CoV-2 spike protein activation pathway reveals unprecedented cryptic pockets  

Biophys J2022       CORD-19
6593Single molecule activity assay for SARS-CoV-2 RNA dependent RNA polymerase  

Biophys J2022       CORD-19
6594Impact of mutations near the SARS-CoV-2 furin-cleavage site on viral infectivity  

Biophys J2022       CORD-19
6595SARS-CoV-2 nucleocapsid protein forms condensates with viral genomic RNA  

Biophys J2022       CORD-19
6596Structural dynamic changes in the SARS-CoV and SARS-CoV-2 S spike assemblies upon ACE2 activation  

Biophys J2022       CORD-19
6597The SARS-CoV-2 spike protein reversibly samples an open-trimer conformation exposing novel epitopes  

Biophys J2022       CORD-19
6598SARS-CoV-2 antibodies specific to the mesa and inner side of spike protein receptor binding domain maintain high affinities for both D614G and b.1.351 variants  

Biophys J2022       CORD-19
6599Changes in the receptor-binding interface may cause immune evasion by the SARS-CoV-2 delta variant b.1.617.2  

Biophys J2022       CORD-19
6600SARS-CoV-2 S1 spike protein peptides inhibit alpha 7 nAChRs and are counteracted by a PAM at alpha 7  

Biophys J2022       CORD-19

(1) COVID-19 Open Research Dataset (CORD-19). 2020. Version 2022-06-02. Retrieved from https://ai2-semanticscholar-cord-19.s3-us-west-2.amazonaws.com/historical_releases.html. Accessed 2022-06-05. doi:10.5281/zenodo.3715506
(2) Chen Q, Allot A, & Lu Z. (2020) Keep up with the latest coronavirus research, Nature 579:193 and Chen Q, Allot A, Lu Z. LitCovid: an open database of COVID-19 literature. Nucleic Acids Research. 2020. (version 2023-01-10)
(3) Currently tweets of June 23rd to June 29th 2022 have been considered.

This service is provided "as is", without any warranties of any kind.